After I have started using Sun Java 6 (java-1.5.0-sun), I encountered a problem with using ant in Eclipse (I didn't try from the command line) - eclipse started complaining about the package org.apache.tools. After some digging in the web, I found out that it is a bug in Ubuntu:
https://bugs.launchpad.net/ubuntu/+source/eclipse/+bug/134537
I used the solution provided by the user Mikael Nilsson and I got it working.
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